This seems to be a common problem! https://www.unicode.org/L2/L2017/17324-decimal-full-stop.pdf
My suggestion would be to place a changes.txt rule in the Arabic text project to change the dot/period to the proper Arabic Thousands Separator (\u066C) so that the entire string of digits an the punctuation are all the same script and all RTL. It should then render as expected. Here's a rule that should do the trick:
"(\d)\.(\d\d\d)" > "\1\u066C\2"
This says, find any digit followed by a period followed by 3 digits, and replace with the 1st match (the single digit) followed by the 066C separator followed by the 2nd match (the 3 digits found on the left side).
Someone else might be able to improve this Regex to also work with much longer numbers where there are 2 separators: 150.000.345.
Then in the window that appears, paste in the above rule shown on line 5. (Note that I commented out the reference to PrintDraftChanges.txt as that's probably not needed):
Let us know how it goes...
Make sure you have also got the Fonts+Scripts settings set to do RTL and Arabic: